Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | UMNK88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli UMNK88 plasmid pUMNK88_91, complete sequence.
Gene Summary
Adenine Count
21816 bp
Thymine Count
23312 bp
Guanine Count
23528 bp
Cytosine Count
22212 bp
Genome Length
90868 bp
Protein-coding Genes
101 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | UMNK88_RS01645 | Not Available | Negative | 330311 - 333121 | 109332.0 |
| Attr | Not Available | Not Available | Positive | 333562 - 333617 | Not Available |
| Lysr family transcriptional regulator | UMNK88_RS01655 | Not Available | Negative | 333734 - 334072 | 13058.8 |
| Attl | Not Available | Not Available | Positive | 913695 - 913708 | Not Available |
| Tyrosine-type recombinase/integrase | UMNK88_RS35195 | Not Available | Negative | 914299 - 915315 | 38949.5 |
| hypothetical protein | UMNK88_RS29935 | Not Available | Negative | 915502 - 915693 | 6777.34 |
| Repressor protein ci | UMNK88_RS04405 | Not Available | Negative | 915709 - 916278 | 21257.4 |
| Regulator | UMNK88_RS04410 | Not Available | Positive | 916404 - 916625 | 8336.26 |
| Regulatory cii family protein | UMNK88_RS04415 | Not Available | Positive | 916658 - 917167 | 18113.9 |
| Hypothetical protein | UMNK88_RS29940 | Not Available | Positive | 917175 - 917375 | 7717.47 |
Pathways
12367 pathways
Health Effects
No health effects information available for this bacterium.





