Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | UMNK88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli UMNK88 plasmid pUMNK88_91, complete sequence.
Gene Summary
Adenine Count
21816 bp
Thymine Count
23312 bp
Guanine Count
23528 bp
Cytosine Count
22212 bp
Genome Length
90868 bp
Protein-coding Genes
101 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | UMNK88_RS01495 | Not Available | Negative | 308981 - 309316 | 13117.3 |
| Hypothetical protein | UMNK88_RS01500 | Not Available | Positive | 309467 - 309817 | 13109.7 |
| Small terminase subunit | UMNK88_RS01505 | Not Available | Positive | 309943 - 310437 | 17897.8 |
| Large terminase subunit | UMNK88_RS01510 | Not Available | Positive | 310434 - 312167 | 65424.7 |
| Putative integral membrane protein | UMNK88_RS01515 | Not Available | Positive | 312179 - 312361 | 6391.17 |
| Portal protein | UMNK88_RS01520 | Not Available | Positive | 312361 - 313602 | 46145.0 |
| Prohead protease | UMNK88_RS01525 | Not Available | Positive | 313580 - 314230 | 23977.5 |
| Phage major capsid protein | UMNK88_RS01530 | Not Available | Positive | 314245 - 315450 | 44296.7 |
| Hypothetical protein | UMNK88_RS01535 | Not Available | Positive | 315500 - 315700 | 7088.47 |
| Head-tail connector protein | UMNK88_RS01540 | Not Available | Positive | 315703 - 316026 | 12518.9 |
Pathways
12367 pathways
Health Effects
No health effects information available for this bacterium.





