Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | UMNK88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli UMNK88 plasmid pUMNK88_91, complete sequence.
Gene Summary
Adenine Count
21816 bp
Thymine Count
23312 bp
Guanine Count
23528 bp
Cytosine Count
22212 bp
Genome Length
90868 bp
Protein-coding Genes
101 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Klia-n domain protein | UMNK88_RS01450 | Not Available | Positive | 303090 - 303887 | 29816.9 |
| Hypothetical protein | UMNK88_RS01455 | Not Available | Positive | 303895 - 304884 | 37228.0 |
| Antiterminator protein q | UMNK88_RS01460 | Not Available | Positive | 304902 - 305255 | 13121.0 |
| caspase domain-containing protein | UMNK88_RS01465 | Not Available | Negative | 305286 - 306251 | 35588.2 |
| tir domain-containing protein | UMNK88_RS01470 | Not Available | Negative | 306262 - 306663 | 15279.4 |
| Class i holin | UMNK88_RS01475 | Not Available | Positive | 306965 - 307291 | 11419.1 |
| Lysin | UMNK88_RS01480 | Not Available | Positive | 307295 - 307771 | 17833.1 |
| Putative rz lytic protein | UMNK88_RS01485 | Not Available | Positive | 307755 - 308135 | 14158.8 |
| Putative rz1 lytic protein | UMNK88_RS34605 | Not Available | Positive | 308032 - 308289 | 9097.08 |
| hypothetical protein | UMNK88_RS01490 | Not Available | Negative | 308311 - 308880 | 21868.2 |
Pathways
12367 pathways
Health Effects
No health effects information available for this bacterium.





