Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | UMNK88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli UMNK88 plasmid pUMNK88_91, complete sequence.
Gene Summary
Adenine Count
21816 bp
Thymine Count
23312 bp
Guanine Count
23528 bp
Cytosine Count
22212 bp
Genome Length
90868 bp
Protein-coding Genes
101 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is3 family transposase | UMNK88_RS33530 | Not Available | Negative | 80569 - 80721 | 5855.09 |
| replication regulatory protein repa | UMNK88_RS26980 | Not Available | Positive | 81218 - 81478 | 9812.84 |
| replication protein repa | UMNK88_RS35465 | Not Available | Negative | 81540 - 81626 | 3158.87 |
| repa leader peptide tap | UMNK88_RS26985 | Not Available | Positive | 81716 - 81790 | 2699.38 |
| Attl | Not Available | Not Available | Positive | 294899 - 294954 | Not Available |
| Integrase | UMNK88_RS01375 | Not Available | Negative | 294959 - 296077 | 43070.9 |
| Excisionase | UMNK88_RS34595 | Not Available | Negative | 295999 - 296433 | 16278.3 |
| Hypothetical protein | UMNK88_RS01380 | Not Available | Negative | 296349 - 296654 | 12120.4 |
| Hypothetical protein | UMNK88_RS01385 | Not Available | Negative | 296654 - 297016 | 13732.3 |
| Hypothetical protein | UMNK88_RS01390 | Not Available | Negative | 297007 - 297543 | 20334.6 |
Pathways
12367 pathways
Health Effects
No health effects information available for this bacterium.





