Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | UMNK88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli UMNK88 plasmid pUMNK88_91, complete sequence.
Gene Summary
Adenine Count
21816 bp
Thymine Count
23312 bp
Guanine Count
23528 bp
Cytosine Count
22212 bp
Genome Length
90868 bp
Protein-coding Genes
101 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transglycosylase slt domain-containing protein | UMNK88_RS26880 | Not Available | Negative | 67970 - 68560 | 22485.2 |
| conjugal transfer relaxosome dna-binding protein tram | UMNK88_RS26885 | Not Available | Positive | 68903 - 69286 | 14421.1 |
| pas domain-containing protein | UMNK88_RS26890 | Not Available | Positive | 69480 - 70166 | 26482.8 |
| conjugal transfer relaxosome protein tray | UMNK88_RS26895 | Not Available | Positive | 70260 - 70487 | 9072.72 |
| type iv conjugative transfer system pilin traa | UMNK88_RS26900 | Not Available | Positive | 70521 - 70880 | 12770.4 |
| type iv conjugative transfer system protein tral | UMNK88_RS26905 | Not Available | Positive | 70895 - 71206 | 11916.7 |
| type iv conjugative transfer system protein trae | UMNK88_RS26910 | Not Available | Positive | 71228 - 71794 | 21239.6 |
| is3 family transposase | UMNK88_RS26915 | Not Available | Positive | 71781 - 72511 | 25057.9 |
| f-type conjugal transfer pilus assembly protein trab | UMNK88_RS26920 | Not Available | Positive | 72511 - 73938 | 50472.8 |
| conjugal transfer protein trap | UMNK88_RS34485 | Not Available | Positive | 73928 - 74263 | 12699.6 |
Pathways
12367 pathways
Health Effects
No health effects information available for this bacterium.





