Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | UMNK88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli UMNK88 plasmid pUMNK88_91, complete sequence.
Gene Summary
Adenine Count
21816 bp
Thymine Count
23312 bp
Guanine Count
23528 bp
Cytosine Count
22212 bp
Genome Length
90868 bp
Protein-coding Genes
101 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is3 family transposase | UMNK88_RS32735 | Not Available | Positive | 29625 - 31236 | 57674.5 |
| cpbp family intramembrane glutamic endopeptidase | UMNK88_RS26645 | Not Available | Positive | 31323 - 31976 | 24310.9 |
| type ii toxin-antitoxin system antitoxin pemi | UMNK88_RS34055 | Not Available | Positive | 32069 - 32326 | 9333.16 |
| type ii toxin-antitoxin system toxin endoribonuclease pemk-mt | UMNK88_RS26655 | Not Available | Positive | 32328 - 32660 | 11881.5 |
| duf262 domain-containing protein | UMNK88_RS26660 | Not Available | Positive | 32944 - 34716 | 67770.3 |
| is3 family transposase | UMNK88_RS26670 | Not Available | Negative | 35192 - 35716 | 20318.1 |
| is21-like element is21 family transposase | UMNK88_RS26675 | Not Available | Negative | 35716 - 36888 | 45871.9 |
| is3 family transposase | UMNK88_RS32740 | Not Available | Negative | 36989 - 37772 | 28106.0 |
| is3 family transposase | UMNK88_RS31635 | Not Available | Positive | 37864 - 38091 | 8470.12 |
| is3 family transposase | UMNK88_RS26690 | Not Available | Negative | 38381 - 38651 | 9879.65 |
Pathways
12367 pathways
Health Effects
No health effects information available for this bacterium.





