Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | UMNK88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli UMNK88 plasmid pUMNK88_91, complete sequence.
Gene Summary
Adenine Count
21816 bp
Thymine Count
23312 bp
Guanine Count
23528 bp
Cytosine Count
22212 bp
Genome Length
90868 bp
Protein-coding Genes
101 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| k88 fimbrial protein faec | UMNK88_RS26480 | Not Available | Positive | 4424 - 4969 | 19067.5 |
| f4 (k88) fimbrial usher faed | UMNK88_RS26485 | Not Available | Positive | 4981 - 7416 | 85397.2 |
| f4 (k88) fimbrial chaperone faee | UMNK88_RS26490 | Not Available | Positive | 7409 - 8185 | 28479.4 |
| f4 (k88) fimbria minor subunit faef | UMNK88_RS26495 | Not Available | Positive | 8220 - 8711 | 17393.9 |
| f4 (k88) fimbria major subunit/adhesin faeg | UMNK88_RS26500 | Not Available | Positive | 8948 - 9796 | 29169.5 |
| f4 (k88) fimbria minor subunit faeh | UMNK88_RS26505 | Not Available | Positive | 9967 - 10764 | 28110.0 |
| f4 (k88) fimbria minor subunit faei | UMNK88_RS26510 | Not Available | Positive | 10794 - 11558 | 26994.2 |
| f4 (k88) fimbria accessory protein faej | UMNK88_RS26515 | Not Available | Positive | 11575 - 12348 | 27955.3 |
| hypothetical protein | UMNK88_RS35360 | Not Available | Positive | 12348 - 12479 | 4958.58 |
| is3 family transposase | UMNK88_RS26520 | Not Available | Negative | 12498 - 12776 | 10547.7 |
Pathways
12367 pathways
Health Effects
No health effects information available for this bacterium.





