Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | UMNK88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli UMNK88 plasmid pUMNK88_91, complete sequence.
Gene Summary
Adenine Count
21816 bp
Thymine Count
23312 bp
Guanine Count
23528 bp
Cytosine Count
22212 bp
Genome Length
90868 bp
Protein-coding Genes
101 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| h-ns family nucleoid-associated regulatory protein | UMNK88_RS29305 | Not Available | Negative | 158683 - 159102 | 16202.3 |
| hypothetical protein | UMNK88_RS29310 | Not Available | Negative | 159104 - 159397 | 10795.7 |
| parm/stba family protein | UMNK88_RS29315 | Not Available | Negative | 159414 - 160397 | 35707.0 |
| hypothetical protein | UMNK88_RS35455 | Not Available | Positive | 1458 - 1652 | 6717.26 |
| type ii toxin-antitoxin system rele/pare family toxin | UMNK88_RS26455 | Not Available | Positive | 1694 - 2023 | 12526.6 |
| helix-turn-helix domain-containing protein | UMNK88_RS26460 | Not Available | Positive | 2004 - 2285 | 10914.2 |
| is3 family transposase | UMNK88_RS35040 | Not Available | Negative | 2335 - 2430 | 3802.59 |
| hypothetical protein | UMNK88_RS26465 | Not Available | Negative | 2430 - 2795 | 13728.3 |
| is1-like element is1a family transposase | UMNK88_RS26470 | Not Available | Negative | 3068 - 3765 | 26455.2 |
| adhesin biosynthesis transcription regulatory family protein | UMNK88_RS26475 | Not Available | Positive | 4080 - 4427 | 13424.0 |
Pathways
12367 pathways
Health Effects
No health effects information available for this bacterium.





