Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | UMNK88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli UMNK88 plasmid pUMNK88_91, complete sequence.
Gene Summary
Adenine Count
21816 bp
Thymine Count
23312 bp
Guanine Count
23528 bp
Cytosine Count
22212 bp
Genome Length
90868 bp
Protein-coding Genes
101 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding protein | UMNK88_RS29250 | Not Available | Positive | 146483 - 147523 | 38436.2 |
| uvrd-helicase domain-containing protein | UMNK88_RS29260 | Not Available | Positive | 147810 - 149321 | 57416.7 |
| conjugal transfer protein traf | UMNK88_RS29265 | Not Available | Positive | 149432 - 150472 | 39025.4 |
| conjugal transfer protein trah | UMNK88_RS29270 | Not Available | Positive | 150474 - 151907 | 51262.9 |
| conjugal transfer protein trag n-terminal domain-containing protein | UMNK88_RS29275 | Not Available | Positive | 151920 - 155534 | 127853.0 |
| hypothetical protein | UMNK88_RS29280 | Not Available | Negative | 155572 - 155934 | 13361.5 |
| transcriptional regulator | UMNK88_RS29285 | Not Available | Positive | 156651 - 156923 | 10517.7 |
| transglycosylase slt domain-containing protein | UMNK88_RS29290 | Not Available | Positive | 156923 - 157456 | 19354.0 |
| hypothetical protein | UMNK88_RS29295 | Not Available | Positive | 157467 - 158075 | 22812.0 |
| flhc family transcriptional regulator | UMNK88_RS29300 | Not Available | Positive | 158072 - 158623 | 20624.0 |
Pathways
12367 pathways
Health Effects
No health effects information available for this bacterium.





