Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | UMNK88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli UMNK88 plasmid pUMNK88_91, complete sequence.
Gene Summary
Adenine Count
21816 bp
Thymine Count
23312 bp
Guanine Count
23528 bp
Cytosine Count
22212 bp
Genome Length
90868 bp
Protein-coding Genes
101 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhs repeat-associated core domain-containing protein | UMNK88_RS29195 | Not Available | Positive | 135560 - 139705 | 151151.0 |
| hypothetical protein | UMNK88_RS29200 | Not Available | Positive | 139695 - 140117 | 16143.6 |
| hypothetical protein | UMNK88_RS34290 | Not Available | Positive | 140288 - 140740 | 16145.4 |
| hypothetical protein | UMNK88_RS29210 | Not Available | Negative | 140756 - 141358 | 21974.2 |
| hypothetical protein | UMNK88_RS29215 | Not Available | Positive | 141628 - 141909 | 9952.73 |
| hypothetical protein | UMNK88_RS29225 | Not Available | Positive | 142208 - 142744 | 20139.1 |
| tyrosine-type recombinase/integrase | UMNK88_RS29230 | Not Available | Positive | 142747 - 143757 | 37695.4 |
| 3'-5' exonuclease | UMNK88_RS29235 | Not Available | Positive | 143762 - 144631 | 31855.2 |
| hypothetical protein | UMNK88_RS29240 | Not Available | Positive | 144628 - 145119 | 18133.4 |
| dna replication terminus site-binding protein | UMNK88_RS29245 | Not Available | Positive | 145446 - 146321 | 32856.6 |
Pathways
12367 pathways
Health Effects
No health effects information available for this bacterium.





