Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | UMNK88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli UMNK88 plasmid pUMNK88_91, complete sequence.
Gene Summary
Adenine Count
21816 bp
Thymine Count
23312 bp
Guanine Count
23528 bp
Cytosine Count
22212 bp
Genome Length
90868 bp
Protein-coding Genes
101 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| recombinase family protein | UMNK88_RS29055 | Not Available | Negative | 112438 - 112995 | 21221.6 |
| class 1 integron integrase inti1 | UMNK88_RS29065 | Not Available | Negative | 113301 - 114314 | 38383.4 |
| aada family aminoglycoside 3''-o-nucleotidyltransferase | UMNK88_RS29070 | Not Available | Positive | 114460 - 115218 | 28263.1 |
| hypothetical protein | UMNK88_RS35165 | Not Available | Positive | 115195 - 115258 | 2091.66 |
| duf1010 domain-containing protein | UMNK88_RS32040 | Not Available | Positive | 115327 - 115572 | 8824.49 |
| ycii family protein | UMNK88_RS29075 | Not Available | Positive | 115591 - 115929 | 12557.0 |
| chloramphenicol efflux mfs transporter cmla5 | UMNK88_RS29080 | Not Available | Positive | 116219 - 117478 | 44377.4 |
| ant(3'')-ia family aminoglycoside nucleotidyltransferase aada2 | UMNK88_RS29085 | Not Available | Positive | 117571 - 118362 | 29550.5 |
| quaternary ammonium compound efflux smr transporter qace delta 1 | UMNK88_RS29090 | Not Available | Positive | 118486 - 118833 | 12332.6 |
| sulfonamide-resistant dihydropteroate synthase sul1 | UMNK88_RS29095 | Not Available | Positive | 118827 - 119666 | 30128.0 |
Pathways
12367 pathways
Health Effects
No health effects information available for this bacterium.





