Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | UMNK88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli UMNK88 plasmid pUMNK88_91, complete sequence.
Gene Summary
Adenine Count
21816 bp
Thymine Count
23312 bp
Guanine Count
23528 bp
Cytosine Count
22212 bp
Genome Length
90868 bp
Protein-coding Genes
101 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molybdenum abc transporter atp-binding protein modc | UMNK88_RS03975 | Not Available | Positive | 822172 - 823230 | 39205.9 |
| bifunctional pyridoxal phosphate/fructose-1,6-bisphosphate phosphatase | UMNK88_RS03980 | Not Available | Negative | 823231 - 824049 | 30203.0 |
| 6-phosphogluconolactonase | UMNK88_RS03985 | Not Available | Positive | 824204 - 825199 | 36309.6 |
| lysr family transcriptional regulator | UMNK88_RS03990 | Not Available | Negative | 825240 - 826193 | 36074.2 |
| 4-oxalomesaconate tautomerase | UMNK88_RS03995 | Not Available | Positive | 826377 - 827429 | 37061.7 |
| anion permease | UMNK88_RS04000 | Not Available | Positive | 827505 - 828938 | 51353.8 |
| hydratase | UMNK88_RS04005 | Not Available | Positive | 829121 - 831382 | 81463.1 |
| putative acyl-coa thioester hydrolase | UMNK88_RS04010 | Not Available | Negative | 831616 - 832899 | 46084.7 |
| kinase inhibitor | UMNK88_RS04015 | Not Available | Negative | 833051 - 833527 | 17086.0 |
| adenosylmethionine--8-amino-7-oxononanoate transaminase | UMNK88_RS04020 | Not Available | Negative | 833586 - 834875 | 47340.3 |
Pathways
12367 pathways
Health Effects
No health effects information available for this bacterium.





