Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | UMNK88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli UMNK88 plasmid pUMNK88_91, complete sequence.
Gene Summary
Adenine Count
21816 bp
Thymine Count
23312 bp
Guanine Count
23528 bp
Cytosine Count
22212 bp
Genome Length
90868 bp
Protein-coding Genes
101 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrial protein | UMNK88_RS03710 | Not Available | Negative | 773697 - 774758 | 39595.7 |
| molecular chaperone | UMNK88_RS03715 | Not Available | Negative | 774755 - 775486 | 27152.9 |
| fimbria/pilus outer membrane usher protein | UMNK88_RS03720 | Not Available | Negative | 775501 - 777960 | 90499.8 |
| fimbrial protein | UMNK88_RS03725 | Not Available | Negative | 778011 - 778577 | 19899.2 |
| citrate synthase | UMNK88_RS03730 | Not Available | Negative | 778967 - 780250 | 48017.7 |
| hypothetical protein | UMNK88_RS33690 | Not Available | Negative | 780456 - 780563 | 3827.66 |
| succinate dehydrogenase cytochrome b556 subunit | UMNK88_RS03740 | Not Available | Positive | 780944 - 781348 | 14948.9 |
| succinate dehydrogenase membrane anchor subunit | UMNK88_RS03745 | Not Available | Positive | 781342 - 781689 | 12868.3 |
| succinate dehydrogenase flavoprotein subunit | UMNK88_RS03750 | Not Available | Positive | 781689 - 783455 | 64425.6 |
| succinate dehydrogenase iron-sulfur subunit sdhb | UMNK88_RS03755 | Not Available | Positive | 783471 - 784187 | 26785.4 |
Pathways
12367 pathways
Health Effects
No health effects information available for this bacterium.





