Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | UMNK88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli UMNK88 plasmid pUMNK88_91, complete sequence.
Gene Summary
Adenine Count
21816 bp
Thymine Count
23312 bp
Guanine Count
23528 bp
Cytosine Count
22212 bp
Genome Length
90868 bp
Protein-coding Genes
101 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | UMNK88_RS03660 | Not Available | Positive | 763869 - 764626 | 29113.8 |
| ybga family protein | UMNK88_RS03665 | Not Available | Positive | 764777 - 765286 | 20212.4 |
| deoxyribodipyrimidine photo-lyase | UMNK88_RS03670 | Not Available | Positive | 765283 - 766701 | 53669.8 |
| dipeptide permease dtpd | UMNK88_RS03675 | Not Available | Negative | 766851 - 768332 | 54162.1 |
| radiation resistance protein ybgi | UMNK88_RS03680 | Not Available | Positive | 768603 - 769346 | 26894.0 |
| 5-oxoprolinase subunit pxpb | UMNK88_RS03685 | Not Available | Positive | 769369 - 770025 | 23948.0 |
| 5-oxoprolinase subunit pxpc | UMNK88_RS03690 | Not Available | Positive | 770019 - 770951 | 34425.5 |
| 5-oxoprolinase subunit pxpa | UMNK88_RS03695 | Not Available | Positive | 770941 - 771675 | 25813.9 |
| endonuclease viii | UMNK88_RS03700 | Not Available | Positive | 771711 - 772502 | 29819.8 |
| abrb family transcriptional regulator | UMNK88_RS03705 | Not Available | Negative | 772499 - 773545 | 36886.1 |
Pathways
12367 pathways
Health Effects
No health effects information available for this bacterium.





