Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | UMNK88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli UMNK88 plasmid pUMNK88_91, complete sequence.
Gene Summary
Adenine Count
21816 bp
Thymine Count
23312 bp
Guanine Count
23528 bp
Cytosine Count
22212 bp
Genome Length
90868 bp
Protein-coding Genes
101 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoglucomutase (alpha-d-glucose-1,6-bisphosphate-dependent) | UMNK88_RS03560 | Not Available | Positive | 739418 - 741058 | 58364.2 |
| lipoprotein | UMNK88_RS03565 | Not Available | Positive | 741272 - 741766 | 18283.0 |
| duf2625 domain-containing protein | UMNK88_RS03570 | Not Available | Negative | 741807 - 742457 | 24638.0 |
| methyl-accepting chemotaxis protein | UMNK88_RS03575 | Not Available | Negative | 742581 - 742730 | 5774.04 |
| putrescine-ornithine antiporter | UMNK88_RS03580 | Not Available | Negative | 742806 - 744125 | 46497.6 |
| ornithine decarboxylase spef | UMNK88_RS03585 | Not Available | Negative | 744122 - 746320 | 82421.3 |
| leader peptide spefl | UMNK88_RS34630 | Not Available | Negative | 746578 - 746682 | 4249.08 |
| two-component system response regulator kdpe | UMNK88_RS03595 | Not Available | Negative | 746916 - 747593 | 25354.7 |
| two-component system sensor histidine kinase kdpd | UMNK88_RS03600 | Not Available | Negative | 747590 - 750274 | 98724.2 |
| k(+)-transporting atpase subunit c | UMNK88_RS03605 | Not Available | Negative | 750267 - 750839 | 20268.3 |
Pathways
12367 pathways
Health Effects
No health effects information available for this bacterium.





