Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | UMNK88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli UMNK88 plasmid pUMNK88_91, complete sequence.
Gene Summary
Adenine Count
21816 bp
Thymine Count
23312 bp
Guanine Count
23528 bp
Cytosine Count
22212 bp
Genome Length
90868 bp
Protein-coding Genes
101 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| citrate lyase subunit alpha | UMNK88_RS03205 | Not Available | Negative | 673016 - 674548 | 55194.0 |
| citrate (pro-3s)-lyase subunit beta | UMNK88_RS03210 | Not Available | Negative | 674559 - 675467 | 33111.6 |
| citrate lyase acyl carrier protein | UMNK88_RS03215 | Not Available | Negative | 675464 - 675760 | 10689.9 |
| [citrate (pro-3s)-lyase] ligase | UMNK88_RS03220 | Not Available | Negative | 675775 - 676833 | 40095.5 |
| sensor histidine kinase dpib | UMNK88_RS03225 | Not Available | Positive | 677213 - 678871 | 61687.8 |
| two-component response regulator dpia | UMNK88_RS03230 | Not Available | Positive | 678840 - 679520 | 25454.9 |
| anaerobic c4-dicarboxylate transporter dcuc | UMNK88_RS03235 | Not Available | Negative | 679561 - 680946 | 48415.3 |
| lipid iv(a) palmitoyltransferase pagp | UMNK88_RS03240 | Not Available | Positive | 681534 - 682094 | 21770.6 |
| transcription antiterminator/rna stability regulator cspe | UMNK88_RS03245 | Not Available | Positive | 682269 - 682478 | 7463.84 |
| fluoride efflux transporter crcb | UMNK88_RS03250 | Not Available | Negative | 682532 - 682915 | 13796.2 |
Pathways
12367 pathways
Health Effects
No health effects information available for this bacterium.





