Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | UMNK88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli UMNK88 plasmid pUMNK88_91, complete sequence.
Gene Summary
Adenine Count
21816 bp
Thymine Count
23312 bp
Guanine Count
23528 bp
Cytosine Count
22212 bp
Genome Length
90868 bp
Protein-coding Genes
101 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase enta | UMNK88_RS03105 | Not Available | Positive | 653530 - 654276 | 26279.2 |
| proofreading thioesterase enth | UMNK88_RS03110 | Not Available | Positive | 654279 - 654692 | 14971.0 |
| pyruvate/proton symporter csta | UMNK88_RS03115 | Not Available | Positive | 654873 - 656978 | 75109.7 |
| ybdd/yjix family protein | UMNK88_RS03120 | Not Available | Positive | 657161 - 657358 | 7467.89 |
| hydroxycarboxylate dehydrogenase hcxa | UMNK88_RS03125 | Not Available | Negative | 657368 - 658456 | 39093.8 |
| methionine-oxo-acid transaminase | UMNK88_RS03130 | Not Available | Positive | 658565 - 659725 | 43007.3 |
| methyl-accepting chemotaxis protein | UMNK88_RS03135 | Not Available | Negative | 659726 - 660354 | 23368.9 |
| phosphoadenosine phosphosulfate reductase | UMNK88_RS03140 | Not Available | Negative | 660327 - 661547 | 47813.1 |
| dna-binding transcriptional repressor citr | UMNK88_RS03145 | Not Available | Negative | 661694 - 662596 | 34376.8 |
| thiol:disulfide interchange protein dsbg | UMNK88_RS03150 | Not Available | Negative | 662805 - 663551 | 27496.5 |
Pathways
12367 pathways
Health Effects
No health effects information available for this bacterium.





