Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | UMNK88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli UMNK88 plasmid pUMNK88_91, complete sequence.
Gene Summary
Adenine Count
21816 bp
Thymine Count
23312 bp
Guanine Count
23528 bp
Cytosine Count
22212 bp
Genome Length
90868 bp
Protein-coding Genes
101 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system tip protein vgrg | UMNK88_RS02955 | Not Available | Negative | 615861 - 617762 | 71378.0 |
| cu(+)/ag(+) sensor histidine kinase cuss | UMNK88_RS02960 | Not Available | Negative | 618499 - 619947 | 54098.6 |
| copper response regulator transcription factor cusr | UMNK88_RS02965 | Not Available | Negative | 619937 - 620620 | 25396.1 |
| cu(+)/ag(+) efflux rnd transporter outer membrane channel cusc | UMNK88_RS02970 | Not Available | Positive | 620777 - 622150 | 50341.6 |
| cu(+)/ag(+) efflux rnd transporter periplasmic metallochaperone cusf | UMNK88_RS02975 | Not Available | Positive | 622308 - 622640 | 12251.9 |
| cu(+)/ag(+) efflux rnd transporter periplasmic adaptor subunit cusb | UMNK88_RS02980 | Not Available | Positive | 622656 - 623879 | 44307.4 |
| cu(+)/ag(+) efflux rnd transporter permease subunit cusa | UMNK88_RS02985 | Not Available | Positive | 623891 - 627034 | 114758.0 |
| phenylalanine transporter | UMNK88_RS02990 | Not Available | Positive | 627136 - 628512 | 50680.4 |
| mechanosensitive ion channel ybdg | UMNK88_RS02995 | Not Available | Negative | 628580 - 629827 | 46605.5 |
| oxygen-insensitive nad(p)h nitroreductase | UMNK88_RS03000 | Not Available | Negative | 629935 - 630588 | 23860.3 |
Pathways
12367 pathways
Health Effects
No health effects information available for this bacterium.





