Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | UMNK88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli UMNK88 plasmid pUMNK88_91, complete sequence.
Gene Summary
Adenine Count
21816 bp
Thymine Count
23312 bp
Guanine Count
23528 bp
Cytosine Count
22212 bp
Genome Length
90868 bp
Protein-coding Genes
101 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine--trna ligase | UMNK88_RS02850 | Not Available | Positive | 590612 - 591997 | 52186.9 |
| metal-dependent hydrolase | UMNK88_RS02855 | Not Available | Negative | 592033 - 592554 | 19457.4 |
| ribosome-associated protein ybcj | UMNK88_RS02860 | Not Available | Negative | 592662 - 592874 | 7389.95 |
| bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase fold | UMNK88_RS02865 | Not Available | Negative | 592876 - 593742 | 31045.6 |
| type 1 fimbrial major subunit fima | UMNK88_RS02870 | Not Available | Positive | 594213 - 594755 | 18475.5 |
| type 1 fimbria chaperone fimc | UMNK88_RS02875 | Not Available | Positive | 594975 - 595667 | 25459.1 |
| fimbrial biogenesis usher protein | UMNK88_RS02880 | Not Available | Positive | 595698 - 598307 | 96044.6 |
| type 1 fimbria d-mannose specific adhesin fimh | UMNK88_RS02885 | Not Available | Positive | 598349 - 599326 | 35472.4 |
| fimbria assembly protein | UMNK88_RS02890 | Not Available | Positive | 599337 - 599852 | 18221.7 |
| fimbria biosynthesis transcriptional regulator fimz | UMNK88_RS02895 | Not Available | Negative | 599855 - 600487 | 23678.9 |
Pathways
12367 pathways
Health Effects
No health effects information available for this bacterium.





