Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | UMNK88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli UMNK88 plasmid pUMNK88_91, complete sequence.
Gene Summary
Adenine Count
21816 bp
Thymine Count
23312 bp
Guanine Count
23528 bp
Cytosine Count
22212 bp
Genome Length
90868 bp
Protein-coding Genes
101 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| allantoate deiminase | UMNK88_RS02800 | Not Available | Negative | 580058 - 581293 | 45600.5 |
| ureidoglycolate dehydrogenase | UMNK88_RS02805 | Not Available | Negative | 581315 - 582364 | 37893.3 |
| acyl-coa synthetase fdra | UMNK88_RS02810 | Not Available | Positive | 582681 - 584348 | 58601.4 |
| duf1116 domain-containing protein | UMNK88_RS02815 | Not Available | Positive | 584358 - 585617 | 44951.6 |
| duf2877 domain-containing protein | UMNK88_RS02820 | Not Available | Positive | 585628 - 586443 | 29731.0 |
| carbamate kinase | UMNK88_RS02825 | Not Available | Positive | 586440 - 587333 | 31574.9 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | UMNK88_RS02830 | Not Available | Negative | 587528 - 588595 | 39436.3 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | UMNK88_RS02835 | Not Available | Negative | 588592 - 589101 | 17781.3 |
| udp-2,3-diacylglucosamine diphosphatase | UMNK88_RS02840 | Not Available | Negative | 589219 - 589941 | 26895.7 |
| peptidylprolyl isomerase b | UMNK88_RS02845 | Not Available | Negative | 589944 - 590438 | 18154.5 |
Pathways
12367 pathways
Health Effects
No health effects information available for this bacterium.





