Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | UMNK88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli UMNK88 plasmid pUMNK88_91, complete sequence.
Gene Summary
Adenine Count
21816 bp
Thymine Count
23312 bp
Guanine Count
23528 bp
Cytosine Count
22212 bp
Genome Length
90868 bp
Protein-coding Genes
101 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ureidoglycolate lyase | UMNK88_RS02750 | Not Available | Positive | 568452 - 568934 | 18223.6 |
| hth-type transcriptional repressor allr | UMNK88_RS02755 | Not Available | Positive | 569012 - 569827 | 29271.4 |
| glyoxylate carboligase | UMNK88_RS02760 | Not Available | Positive | 569917 - 571698 | 64735.5 |
| hydroxypyruvate isomerase | UMNK88_RS02765 | Not Available | Positive | 571711 - 572487 | 29379.1 |
| 2-hydroxy-3-oxopropionate reductase | UMNK88_RS02770 | Not Available | Positive | 572587 - 573465 | 30802.5 |
| allantoin transporter | UMNK88_RS02775 | Not Available | Positive | 573634 - 575088 | 52512.3 |
| allantoinase allb | UMNK88_RS02780 | Not Available | Positive | 575148 - 576509 | 49603.5 |
| uracil/xanthine transporter | UMNK88_RS02785 | Not Available | Positive | 576566 - 577867 | 47242.2 |
| glycerate 3-kinase | UMNK88_RS02790 | Not Available | Positive | 577889 - 579034 | 38730.9 |
| (s)-ureidoglycine aminohydrolase | UMNK88_RS02795 | Not Available | Negative | 579262 - 580047 | 28665.0 |
Pathways
12367 pathways
Health Effects
No health effects information available for this bacterium.





