Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | UMNK88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli UMNK88 plasmid pUMNK88_91, complete sequence.
Gene Summary
Adenine Count
21816 bp
Thymine Count
23312 bp
Guanine Count
23528 bp
Cytosine Count
22212 bp
Genome Length
90868 bp
Protein-coding Genes
101 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative abc transporter atp-binding protein ybba | UMNK88_RS02705 | Not Available | Positive | 555734 - 556420 | 24534.5 |
| putative abc transporter permease subunit ybbp | UMNK88_RS02710 | Not Available | Positive | 556417 - 558831 | 89337.5 |
| rhs element protein rhsd | UMNK88_RS02715 | Not Available | Positive | 559262 - 563542 | 159937.0 |
| ybbc/yhhh family protein | UMNK88_RS02720 | Not Available | Positive | 563582 - 563950 | 14153.2 |
| methyl-accepting chemotaxis protein | UMNK88_RS02725 | Not Available | Positive | 563953 - 564660 | 26830.4 |
| hypothetical protein | UMNK88_RS32130 | Not Available | Positive | 564641 - 564901 | 10052.4 |
| hypothetical protein | UMNK88_RS34305 | Not Available | Positive | 564958 - 565131 | 6172.42 |
| methyl-accepting chemotaxis protein | UMNK88_RS02735 | Not Available | Negative | 565652 - 566017 | 13753.4 |
| trna 2-selenouridine(34) synthase mnmh | UMNK88_RS02740 | Not Available | Negative | 566133 - 567227 | 41327.5 |
| hth-type transcriptional activator alls | UMNK88_RS02745 | Not Available | Negative | 567296 - 568222 | 34513.6 |
Pathways
12367 pathways
Health Effects
No health effects information available for this bacterium.





