Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | UMNK88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli UMNK88 plasmid pUMNK88_91, complete sequence.
Gene Summary
Adenine Count
21816 bp
Thymine Count
23312 bp
Guanine Count
23528 bp
Cytosine Count
22212 bp
Genome Length
90868 bp
Protein-coding Genes
101 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| apc family permease | UMNK88_RS02660 | Not Available | Positive | 548577 - 549869 | 45661.5 |
| methyl-accepting chemotaxis protein | UMNK88_RS34620 | Not Available | Positive | 549900 - 549997 | 3637.51 |
| cu(i)-responsive transcriptional regulator | UMNK88_RS02665 | Not Available | Positive | 549994 - 550401 | 15236.0 |
| nfed family protein | UMNK88_RS02670 | Not Available | Negative | 550402 - 550860 | 16939.8 |
| spfh domain-containing protein | UMNK88_RS02675 | Not Available | Negative | 550857 - 551774 | 33745.1 |
| iron efflux abc transporter atp-binding subunit feta | UMNK88_RS02680 | Not Available | Positive | 551920 - 552597 | 25383.5 |
| iron efflux abc transporter permease subunit fetb | UMNK88_RS02685 | Not Available | Positive | 552584 - 553363 | 28166.5 |
| chaperedoxin | UMNK88_RS02690 | Not Available | Negative | 553426 - 554280 | 31792.9 |
| nadp(+)-dependent aldehyde reductase | UMNK88_RS02695 | Not Available | Negative | 554341 - 555150 | 29412.0 |
| multifunctional acyl-coa thioesterase i/protease i/lysophospholipase l1 | UMNK88_RS02700 | Not Available | Negative | 555140 - 555763 | 23492.3 |
Pathways
12367 pathways
Health Effects
No health effects information available for this bacterium.





