Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | UMNK88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli UMNK88 plasmid pUMNK88_91, complete sequence.
Gene Summary
Adenine Count
21816 bp
Thymine Count
23312 bp
Guanine Count
23528 bp
Cytosine Count
22212 bp
Genome Length
90868 bp
Protein-coding Genes
101 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hmp-pp phosphatase | UMNK88_RS02460 | Not Available | Positive | 503413 - 504231 | 30330.6 |
| dna-binding transcriptional regulator decr | UMNK88_RS02465 | Not Available | Positive | 504384 - 504842 | 17438.4 |
| smda family multidrug abc transporter permease/atp-binding protein | UMNK88_RS02470 | Not Available | Positive | 504872 - 506644 | 66023.4 |
| smdb family multidrug efflux abc transporter permease/atp-binding protein | UMNK88_RS02475 | Not Available | Positive | 506637 - 508418 | 65226.5 |
| p-ii family nitrogen regulator | UMNK88_RS02480 | Not Available | Positive | 508599 - 508937 | 12259.9 |
| ammonium transporter amtb | UMNK88_RS02485 | Not Available | Positive | 508967 - 510253 | 44517.4 |
| acyl-coa thioesterase ii | UMNK88_RS02490 | Not Available | Negative | 510302 - 511162 | 31968.1 |
| ybay family lipoprotein | UMNK88_RS02495 | Not Available | Positive | 511380 - 511952 | 19442.3 |
| mgmt family protein | UMNK88_RS02500 | Not Available | Negative | 511983 - 512294 | 11488.8 |
| Ncrna_class:srp_rna | Not Available | Not Available | Positive | 512457 - 512553 | Not Available |
Pathways
12367 pathways
Health Effects
No health effects information available for this bacterium.





