Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | UMNK88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli UMNK88 plasmid pUMNK88_91, complete sequence.
Gene Summary
Adenine Count
21816 bp
Thymine Count
23312 bp
Guanine Count
23528 bp
Cytosine Count
22212 bp
Genome Length
90868 bp
Protein-coding Genes
101 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trigger factor | UMNK88_RS02410 | Not Available | Positive | 491133 - 492431 | 48195.4 |
| atp-dependent clp endopeptidase proteolytic subunit clpp | UMNK88_RS02415 | Not Available | Positive | 492677 - 493300 | 23188.1 |
| atp-dependent protease atp-binding subunit clpx | UMNK88_RS02420 | Not Available | Positive | 493426 - 494700 | 46358.7 |
| endopeptidase la | UMNK88_RS02425 | Not Available | Positive | 494888 - 497242 | 87443.4 |
| nucleoid-associated protein hu-beta | UMNK88_RS02430 | Not Available | Positive | 497433 - 497723 | 10050.2 |
| peptidylprolyl isomerase | UMNK88_RS02435 | Not Available | Positive | 497916 - 499787 | 68167.8 |
| helix-hairpin-helix domain-containing protein | UMNK88_RS02440 | Not Available | Positive | 499938 - 500309 | 12651.3 |
| long-chain acyl-coa thioesterase fadm | UMNK88_RS02445 | Not Available | Positive | 500403 - 500801 | 15016.2 |
| 7-cyano-7-deazaguanine synthase quec | UMNK88_RS02450 | Not Available | Negative | 500853 - 501548 | 25481.5 |
| sgrr family transcriptional regulator | UMNK88_RS02455 | Not Available | Negative | 501613 - 503277 | 63333.2 |
Pathways
12367 pathways
Health Effects
No health effects information available for this bacterium.





