Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | UMNK88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli UMNK88 plasmid pUMNK88_91, complete sequence.
Gene Summary
Adenine Count
21816 bp
Thymine Count
23312 bp
Guanine Count
23528 bp
Cytosine Count
22212 bp
Genome Length
90868 bp
Protein-coding Genes
101 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3363 domain-containing protein | UMNK88_RS35155 | Not Available | Positive | 24428 - 25312 | 33025.4 |
| chloramphenicol/florfenicol efflux mfs transporter flor | UMNK88_RS28575 | Not Available | Positive | 25529 - 26743 | 42637.3 |
| lysr family transcriptional regulator | UMNK88_RS28580 | Not Available | Positive | 26771 - 27076 | 11146.6 |
| hypothetical protein | UMNK88_RS33625 | Not Available | Positive | 27188 - 27376 | 7406.65 |
| tetracycline efflux mfs transporter tet(a) | UMNK88_RS28585 | Not Available | Negative | 27343 - 28542 | 42350.7 |
| tetracycline resistance transcriptional repressor tetr(a) | UMNK88_RS28590 | Not Available | Positive | 28648 - 29298 | 23321.6 |
| transposase | UMNK88_RS28595 | Not Available | Negative | 29330 - 29572 | 8907.68 |
| aminoglycoside o-phosphotransferase aph(6)-id | UMNK88_RS28605 | Not Available | Negative | 29878 - 30714 | 30825.7 |
| aminoglycoside o-phosphotransferase aph(3'')-ib | UMNK88_RS28610 | Not Available | Negative | 30714 - 31517 | 29588.2 |
| sulfonamide-resistant dihydropteroate synthase sul2 | UMNK88_RS28615 | Not Available | Negative | 31578 - 32393 | 28471.1 |
Pathways
12367 pathways
Health Effects
No health effects information available for this bacterium.





