Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | UMNK88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli UMNK88 plasmid pUMNK88_91, complete sequence.
Gene Summary
Adenine Count
21816 bp
Thymine Count
23312 bp
Guanine Count
23528 bp
Cytosine Count
22212 bp
Genome Length
90868 bp
Protein-coding Genes
101 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleotide binding protein yajq | UMNK88_RS02355 | Not Available | Positive | 480683 - 481174 | 18344.9 |
| mfs transporter | UMNK88_RS02360 | Not Available | Negative | 481302 - 482666 | 48813.0 |
| heme o synthase | UMNK88_RS02365 | Not Available | Negative | 482815 - 483705 | 32250.4 |
| cytochrome o ubiquinol oxidase subunit iv | UMNK88_RS02370 | Not Available | Negative | 483717 - 484046 | 12030.2 |
| cytochrome o ubiquinol oxidase subunit iii | UMNK88_RS02375 | Not Available | Negative | 484046 - 484660 | 22624.0 |
| cytochrome o ubiquinol oxidase subunit i | UMNK88_RS02380 | Not Available | Negative | 484650 - 486641 | 74372.2 |
| cytochrome o ubiquinol oxidase subunit ii | UMNK88_RS02385 | Not Available | Negative | 486663 - 487610 | 34913.2 |
| muropeptide mfs transporter ampg | UMNK88_RS02390 | Not Available | Negative | 488070 - 489545 | 53248.3 |
| lipoprotein | UMNK88_RS02395 | Not Available | Negative | 489589 - 490167 | 20951.3 |
| transcriptional regulator bola | UMNK88_RS02400 | Not Available | Positive | 490472 - 490789 | 11994.3 |
Pathways
12367 pathways
Health Effects
No health effects information available for this bacterium.





