Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | UMNK88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli UMNK88 plasmid pUMNK88_91, complete sequence.
Gene Summary
Adenine Count
21816 bp
Thymine Count
23312 bp
Guanine Count
23528 bp
Cytosine Count
22212 bp
Genome Length
90868 bp
Protein-coding Genes
101 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna guanosine(34) transglycosylase tgt | UMNK88_RS02250 | Not Available | Positive | 462137 - 463264 | 42596.1 |
| preprotein translocase subunit yajc | UMNK88_RS02255 | Not Available | Positive | 463287 - 463619 | 11887.9 |
| protein translocase subunit secd | UMNK88_RS02260 | Not Available | Positive | 463647 - 465494 | 66636.3 |
| protein translocase subunit secf | UMNK88_RS02265 | Not Available | Positive | 465505 - 466476 | 35384.6 |
| hnh nuclease yajd | UMNK88_RS02270 | Not Available | Positive | 466605 - 466952 | 13364.7 |
| nucleoside-specific channel-forming protein tsx | UMNK88_RS02280 | Not Available | Negative | 467129 - 468013 | 33590.6 |
| duf3251 domain-containing protein | UMNK88_RS02285 | Not Available | Negative | 468312 - 468851 | 19600.6 |
| transcriptional regulator nrdr | UMNK88_RS02290 | Not Available | Positive | 469002 - 469451 | 17229.9 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | UMNK88_RS02295 | Not Available | Positive | 469455 - 470558 | 40380.6 |
| 6,7-dimethyl-8-ribityllumazine synthase | UMNK88_RS02300 | Not Available | Positive | 470647 - 471117 | 16157.4 |
Pathways
12367 pathways
Health Effects
No health effects information available for this bacterium.





