Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | UMNK88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli UMNK88 plasmid pUMNK88_91, complete sequence.
Gene Summary
Adenine Count
21816 bp
Thymine Count
23312 bp
Guanine Count
23528 bp
Cytosine Count
22212 bp
Genome Length
90868 bp
Protein-coding Genes
101 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter araj | UMNK88_RS02200 | Not Available | Negative | 447297 - 448481 | 41927.1 |
| exonuclease subunit sbcc | UMNK88_RS02205 | Not Available | Negative | 448607 - 451753 | 118728.0 |
| exonuclease subunit sbcd | UMNK88_RS02210 | Not Available | Negative | 451750 - 452952 | 44716.1 |
| phosphate response regulator transcription factor phob | UMNK88_RS02215 | Not Available | Positive | 453142 - 453831 | 26435.0 |
| phosphate regulon sensor histidine kinase phor | UMNK88_RS02220 | Not Available | Positive | 453889 - 455184 | 49647.4 |
| branched-chain amino acid transporter carrier protein brnq | UMNK88_RS02225 | Not Available | Positive | 455591 - 456910 | 46211.5 |
| proline-specific permease proy | UMNK88_RS02230 | Not Available | Positive | 456986 - 458359 | 50218.8 |
| maltodextrin glucosidase | UMNK88_RS02235 | Not Available | Positive | 458515 - 460332 | 69179.9 |
| acp phosphodiesterase | UMNK88_RS02240 | Not Available | Negative | 460337 - 460918 | 22962.3 |
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | UMNK88_RS02245 | Not Available | Positive | 461011 - 462081 | 39433.0 |
Pathways
12367 pathways
Health Effects
No health effects information available for this bacterium.





