Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | UMNK88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli UMNK88 plasmid pUMNK88_91, complete sequence.
Gene Summary
Adenine Count
21816 bp
Thymine Count
23312 bp
Guanine Count
23528 bp
Cytosine Count
22212 bp
Genome Length
90868 bp
Protein-coding Genes
101 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide antibiotic transporter sbma | UMNK88_RS02100 | Not Available | Positive | 432741 - 433961 | 46496.0 |
| surface-exposed outer membrane lipoprotein yaiw | UMNK88_RS02105 | Not Available | Positive | 433974 - 435068 | 40345.4 |
| yaiy family protein | UMNK88_RS02110 | Not Available | Negative | 435127 - 435435 | 11425.2 |
| duf2754 domain-containing protein | UMNK88_RS32995 | Not Available | Positive | 435695 - 435907 | 8097.92 |
| d-alanine--d-alanine ligase | UMNK88_RS02120 | Not Available | Negative | 435931 - 437025 | 39318.0 |
| hypothetical protein | UMNK88_RS34180 | Not Available | Positive | 437103 - 437306 | 8064.23 |
| anti-adapter protein irap | UMNK88_RS02130 | Not Available | Positive | 437488 - 437748 | 9938.05 |
| alkaline phosphatase | UMNK88_RS02135 | Not Available | Positive | 437849 - 439264 | 49428.2 |
| phosphate starvation-inducible protein psif | UMNK88_RS02140 | Not Available | Positive | 439383 - 439703 | 11687.2 |
| diguanylate cyclase adra | UMNK88_RS02145 | Not Available | Positive | 439805 - 440920 | 41486.9 |
Pathways
12367 pathways
Health Effects
No health effects information available for this bacterium.





