Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | UMNK88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli UMNK88 plasmid pUMNK88_91, complete sequence.
Gene Summary
Adenine Count
21816 bp
Thymine Count
23312 bp
Guanine Count
23528 bp
Cytosine Count
22212 bp
Genome Length
90868 bp
Protein-coding Genes
101 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | UMNK88_RS02040 | Not Available | Negative | 419941 - 421137 | 44696.9 |
| pig-l deacetylase family protein | UMNK88_RS02045 | Not Available | Negative | 421147 - 421818 | 25041.2 |
| methyl-accepting chemotaxis protein | UMNK88_RS02055 | Not Available | Positive | 422434 - 423396 | 34097.7 |
| taurine abc transporter atp-binding subunit | UMNK88_RS02060 | Not Available | Positive | 423409 - 424176 | 28306.6 |
| taurine abc transporter permease tauc | UMNK88_RS02065 | Not Available | Positive | 424173 - 425000 | 29562.5 |
| taurine dioxygenase | UMNK88_RS02070 | Not Available | Positive | 424997 - 425848 | 32392.2 |
| porphobilinogen synthase | UMNK88_RS02075 | Not Available | Negative | 426006 - 426980 | 35644.9 |
| autotransporter adhesin ehab | UMNK88_RS02080 | Not Available | Positive | 427503 - 430520 | 107823.0 |
| hydrogen peroxide resistance inhibitor ipra | UMNK88_RS02085 | Not Available | Positive | 430608 - 431231 | 23930.0 |
| d-alanyl-d-alanine- carboxypeptidase/endopeptidase amph | UMNK88_RS02090 | Not Available | Negative | 431232 - 432389 | 41820.4 |
Pathways
12367 pathways
Health Effects
No health effects information available for this bacterium.





