Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | UMNK88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli UMNK88 plasmid pUMNK88_91, complete sequence.
Gene Summary
Adenine Count
21816 bp
Thymine Count
23312 bp
Guanine Count
23528 bp
Cytosine Count
22212 bp
Genome Length
90868 bp
Protein-coding Genes
101 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-keto-4-pentenoate hydratase | UMNK88_RS01990 | Not Available | Positive | 410860 - 411669 | 28891.6 |
| acetaldehyde dehydrogenase | UMNK88_RS01995 | Not Available | Positive | 411666 - 412616 | 33444.5 |
| 4-hydroxy-2-oxovalerate aldolase | UMNK88_RS02000 | Not Available | Positive | 412613 - 413626 | 36472.6 |
| 3-(3-hydroxy-phenyl)propionate transporter | UMNK88_RS02005 | Not Available | Positive | 414002 - 415213 | 41553.4 |
| duf2058 domain-containing protein | UMNK88_RS02010 | Not Available | Positive | 415315 - 415854 | 19923.8 |
| methyl-accepting chemotaxis protein | UMNK88_RS02015 | Not Available | Negative | 416078 - 416909 | 30199.9 |
| s-(hydroxymethyl)glutathione dehydrogenase | UMNK88_RS02020 | Not Available | Negative | 417002 - 418111 | 39335.2 |
| formaldehyde-responsive transcriptional repressor frmr | UMNK88_RS02025 | Not Available | Negative | 418146 - 418421 | 10318.3 |
| yaio family outer membrane beta-barrel protein | UMNK88_RS02030 | Not Available | Negative | 418607 - 419380 | 29004.8 |
| acetyltransferase | UMNK88_RS02035 | Not Available | Negative | 419382 - 419963 | 20718.3 |
Pathways
12367 pathways
Health Effects
No health effects information available for this bacterium.





