Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | UMNK88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli UMNK88 plasmid pUMNK88_91, complete sequence.
Gene Summary
Adenine Count
21816 bp
Thymine Count
23312 bp
Guanine Count
23528 bp
Cytosine Count
22212 bp
Genome Length
90868 bp
Protein-coding Genes
101 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cyanase | UMNK88_RS01940 | Not Available | Positive | 398235 - 398705 | 17033.8 |
| cyanate transporter cynx | UMNK88_RS01945 | Not Available | Positive | 398711 - 399892 | 42521.6 |
| methyl-accepting chemotaxis protein | UMNK88_RS01950 | Not Available | Negative | 399995 - 400605 | 22882.9 |
| lactose permease | UMNK88_RS01955 | Not Available | Negative | 400671 - 401924 | 46505.9 |
| beta-galactosidase | UMNK88_RS01960 | Not Available | Negative | 401976 - 405050 | 116638.0 |
| dna-binding transcriptional repressor laci | UMNK88_RS01965 | Not Available | Negative | 405173 - 406255 | 38592.5 |
| dna-binding transcriptional regulator | UMNK88_RS01970 | Not Available | Negative | 406332 - 407165 | 31305.0 |
| bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase | UMNK88_RS01975 | Not Available | Positive | 407356 - 409020 | 62156.3 |
| 2,3-dihydroxyphenylpropionate/2, 3-dihydroxicinnamic acid 1,2-dioxygenase | UMNK88_RS01980 | Not Available | Positive | 409022 - 409966 | 34198.0 |
| 2-hydroxy-6-oxonona-2,4-dienedioate hydrolase | UMNK88_RS01985 | Not Available | Positive | 409984 - 410850 | 31953.4 |
Pathways
12367 pathways
Health Effects
No health effects information available for this bacterium.





