Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | UMNK88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli UMNK88 plasmid pUMNK88_91, complete sequence.
Gene Summary
Adenine Count
21816 bp
Thymine Count
23312 bp
Guanine Count
23528 bp
Cytosine Count
22212 bp
Genome Length
90868 bp
Protein-coding Genes
101 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1471 family periplasmic protein yaho | UMNK88_RS01890 | Not Available | Positive | 385229 - 385504 | 9895.93 |
| propionate catabolism operon regulatory protein prpr | UMNK88_RS01895 | Not Available | Negative | 385602 - 387188 | 58652.9 |
| methylisocitrate lyase | UMNK88_RS01900 | Not Available | Positive | 387427 - 388317 | 32136.5 |
| 2-methylcitrate synthase | UMNK88_RS01905 | Not Available | Positive | 388664 - 389833 | 43104.6 |
| 2-methylcitrate dehydratase | UMNK88_RS01910 | Not Available | Positive | 389867 - 391318 | 53954.7 |
| propionate--coa ligase | UMNK88_RS01915 | Not Available | Positive | 391358 - 393244 | 69381.8 |
| cytosine permease | UMNK88_RS01920 | Not Available | Positive | 393668 - 394927 | 43652.3 |
| cytosine/isoguanine deaminase | UMNK88_RS01925 | Not Available | Positive | 394917 - 396200 | 47596.9 |
| transcriptional regulator cynr | UMNK88_RS01930 | Not Available | Negative | 396537 - 397436 | 32962.8 |
| carbonic anhydrase cynt | UMNK88_RS01935 | Not Available | Positive | 397545 - 398204 | 23765.6 |
Pathways
12367 pathways
Health Effects
No health effects information available for this bacterium.





