Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | UMNK88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli UMNK88 plasmid pUMNK88_91, complete sequence.
Gene Summary
Adenine Count
21816 bp
Thymine Count
23312 bp
Guanine Count
23528 bp
Cytosine Count
22212 bp
Genome Length
90868 bp
Protein-coding Genes
101 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| betaine-aldehyde dehydrogenase | UMNK88_RS01800 | Not Available | Negative | 366081 - 367553 | 52914.1 |
| transcriptional regulator beti | UMNK88_RS01805 | Not Available | Negative | 367567 - 368154 | 21816.3 |
| choline bcct transporter bett | UMNK88_RS01810 | Not Available | Positive | 368283 - 370316 | 75846.5 |
| protein yahv | UMNK88_RS33670 | Not Available | Positive | 370622 - 370696 | 2629.59 |
| dna-binding transcriptional activator/c-di-gmp phosphodiesterase pdel | UMNK88_RS01820 | Not Available | Positive | 371209 - 372297 | 40745.3 |
| lysr substrate-binding domain-containing protein | UMNK88_RS01825 | Not Available | Negative | 372339 - 373271 | 34798.9 |
| duf1097 domain-containing protein | UMNK88_RS01830 | Not Available | Negative | 373363 - 373860 | 17312.0 |
| ankyrin repeat domain-containing protein | UMNK88_RS01835 | Not Available | Positive | 374118 - 374723 | 21688.3 |
| duf2877 domain-containing protein | UMNK88_RS01840 | Not Available | Positive | 374763 - 375626 | 32267.6 |
| acyl-coa synthetase fdra | UMNK88_RS01845 | Not Available | Positive | 375616 - 377163 | 55584.1 |
Pathways
12367 pathways
Health Effects
No health effects information available for this bacterium.





