Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | UMNK88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli UMNK88 plasmid pUMNK88_91, complete sequence.
Gene Summary
Adenine Count
21816 bp
Thymine Count
23312 bp
Guanine Count
23528 bp
Cytosine Count
22212 bp
Genome Length
90868 bp
Protein-coding Genes
101 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | UMNK88_RS33665 | Not Available | Positive | 356259 - 356387 | 4697.56 |
| reactive chlorine species resistance protein rclc | UMNK88_RS01750 | Not Available | Negative | 356546 - 357139 | 21900.7 |
| reactive chlorine resistance periplasmic protein rclb | UMNK88_RS01755 | Not Available | Negative | 357151 - 357387 | 8472.22 |
| reactive chlorine resistance oxidoreductase rcla | UMNK88_RS01760 | Not Available | Negative | 357496 - 358821 | 48247.1 |
| reactive chlorine-specific transcriptional regulator rclr | UMNK88_RS01765 | Not Available | Positive | 359047 - 359901 | 31476.2 |
| (fe-s)-binding protein | UMNK88_RS01770 | Not Available | Positive | 360428 - 361147 | 26005.8 |
| lutb/lldf family l-lactate oxidation iron-sulfur protein | UMNK88_RS01775 | Not Available | Positive | 361158 - 362585 | 53055.0 |
| lactate utilization protein c | UMNK88_RS01780 | Not Available | Positive | 362578 - 363273 | 25214.2 |
| protein ykgh | UMNK88_RS01790 | Not Available | Negative | 363516 - 364184 | 25604.3 |
| choline dehydrogenase | UMNK88_RS01795 | Not Available | Negative | 364397 - 366067 | 61896.1 |
Pathways
12367 pathways
Health Effects
No health effects information available for this bacterium.





