Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | UMNK88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli UMNK88 plasmid pUMNK88_91, complete sequence.
Gene Summary
Adenine Count
21816 bp
Thymine Count
23312 bp
Guanine Count
23528 bp
Cytosine Count
22212 bp
Genome Length
90868 bp
Protein-coding Genes
101 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-thr | Not Available | Not Available | Positive | 294869 - 294944 | Not Available |
| molybdenum cofactor insertion chaperone paod | UMNK88_RS01660 | Not Available | Negative | 334123 - 335079 | 34932.9 |
| aldehyde oxidoreductase molybdenum-binding subunit paoc | UMNK88_RS01665 | Not Available | Negative | 335089 - 337287 | 78099.8 |
| aldehyde oxidoreductase fad-binding subunit paob | UMNK88_RS01670 | Not Available | Negative | 337284 - 338240 | 33829.8 |
| aldehyde dehydrogenase iron-sulfur subunit paoa | UMNK88_RS01675 | Not Available | Negative | 338237 - 338926 | 24316.0 |
| methyl-accepting chemotaxis protein | UMNK88_RS01680 | Not Available | Positive | 339344 - 339957 | 22580.0 |
| ykgj family cysteine cluster protein | UMNK88_RS01685 | Not Available | Negative | 340205 - 340534 | 11799.1 |
| fimbrial chaperone ecpe | UMNK88_RS01690 | Not Available | Negative | 340847 - 341557 | 26622.6 |
| fimbrial adhesin ecpd | UMNK88_RS01695 | Not Available | Negative | 341526 - 343169 | 59997.1 |
| fimbrial usher ecpc | UMNK88_RS01700 | Not Available | Negative | 343159 - 345684 | 91233.7 |
Pathways
12367 pathways
Health Effects
No health effects information available for this bacterium.





