Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | UMNK88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli UMNK88 plasmid pUMNK88_91, complete sequence.
Gene Summary
Adenine Count
21816 bp
Thymine Count
23312 bp
Guanine Count
23528 bp
Cytosine Count
22212 bp
Genome Length
90868 bp
Protein-coding Genes
101 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoprotein | UMNK88_RS01110 | Not Available | Positive | 240163 - 240948 | 29607.2 |
| protein ykfm | UMNK88_RS01115 | Not Available | Negative | 241085 - 241564 | 18118.9 |
| hypothetical protein | UMNK88_RS01120 | Not Available | Negative | 241574 - 242488 | 33993.4 |
| hcp family type vi secretion system effector | UMNK88_RS01125 | Not Available | Negative | 242532 - 243014 | 18000.5 |
| methyl-accepting chemotaxis protein | UMNK88_RS01130 | Not Available | Negative | 242941 - 244390 | 54287.8 |
| methyl-accepting chemotaxis protein | UMNK88_RS01135 | Not Available | Negative | 244401 - 247831 | 125864.0 |
| type vi secretion system protein tssa | UMNK88_RS01140 | Not Available | Negative | 247940 - 249352 | 52378.1 |
| type vi secretion system-associated protein vasi | UMNK88_RS01145 | Not Available | Negative | 249357 - 250100 | 26444.7 |
| type vi secretion system atpase tssh | UMNK88_RS01150 | Not Available | Negative | 250097 - 252862 | 101053.0 |
| type ivb secretion system protein icmh/dotu | UMNK88_RS01155 | Not Available | Negative | 252871 - 253632 | 29350.7 |
Pathways
12367 pathways
Health Effects
No health effects information available for this bacterium.





