Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | UMNK88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli UMNK88 plasmid pUMNK88_91, complete sequence.
Gene Summary
Adenine Count
21816 bp
Thymine Count
23312 bp
Guanine Count
23528 bp
Cytosine Count
22212 bp
Genome Length
90868 bp
Protein-coding Genes
101 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2,5-didehydrogluconate reductase dkgb | UMNK88_RS01060 | Not Available | Positive | 231995 - 232798 | 29438.4 |
| dna-binding transcriptional regulator yafc | UMNK88_RS01065 | Not Available | Negative | 232795 - 233709 | 33781.7 |
| endonuclease/exonuclease/phosphatase family protein | UMNK88_RS01070 | Not Available | Positive | 233950 - 234750 | 29993.4 |
| class i sam-dependent methyltransferase | UMNK88_RS01075 | Not Available | Positive | 234754 - 235377 | 22992.4 |
| murein transglycosylase d | UMNK88_RS01080 | Not Available | Negative | 235425 - 236783 | 49420.3 |
| hydroxyacylglutathione hydrolase | UMNK88_RS01085 | Not Available | Negative | 236855 - 237610 | 28435.9 |
| class i sam-dependent methyltransferase | UMNK88_RS01090 | Not Available | Positive | 237644 - 238366 | 27245.7 |
| ribonuclease hi | UMNK88_RS01095 | Not Available | Negative | 238363 - 238830 | 17597.9 |
| dna polymerase iii subunit epsilon | UMNK88_RS01100 | Not Available | Positive | 238895 - 239626 | 27100.5 |
| Trna-asp | Not Available | Not Available | Positive | 239759 - 239835 | Not Available |
Pathways
12367 pathways
Health Effects
No health effects information available for this bacterium.





