Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | UMNK88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli UMNK88 plasmid pUMNK88_91, complete sequence.
Gene Summary
Adenine Count
21816 bp
Thymine Count
23312 bp
Guanine Count
23528 bp
Cytosine Count
22212 bp
Genome Length
90868 bp
Protein-coding Genes
101 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna lysidine(34) synthetase tils | UMNK88_RS00960 | Not Available | Positive | 215158 - 216456 | 48206.9 |
| rho-binding antiterminator | UMNK88_RS00965 | Not Available | Negative | 216505 - 216765 | 9698.45 |
| yaep family protein | UMNK88_RS00970 | Not Available | Negative | 216752 - 216952 | 7214.59 |
| yaeq family protein | UMNK88_RS00975 | Not Available | Positive | 217118 - 217663 | 20877.7 |
| alternative ribosome rescue aminoacyl-trna hydrolase arfb | UMNK88_RS00980 | Not Available | Positive | 217660 - 218082 | 15624.0 |
| envelope stress response activation lipoprotein nlpe | UMNK88_RS00985 | Not Available | Positive | 218096 - 218806 | 25845.7 |
| yaef family permuted papain-like enzyme | UMNK88_RS00990 | Not Available | Negative | 219006 - 219830 | 29947.9 |
| proline--trna ligase | UMNK88_RS00995 | Not Available | Negative | 219883 - 221601 | 63626.2 |
| trna (n6-threonylcarbamoyladenosine(37)-n6)-methyltransferase trmo | UMNK88_RS01000 | Not Available | Negative | 221712 - 222419 | 26363.8 |
| rcs stress response system protein rcsf | UMNK88_RS01005 | Not Available | Negative | 222416 - 222820 | 14164.3 |
Pathways
12367 pathways
Health Effects
No health effects information available for this bacterium.





