Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | UMNK88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli UMNK88 plasmid pUMNK88_91, complete sequence.
Gene Summary
Adenine Count
21816 bp
Thymine Count
23312 bp
Guanine Count
23528 bp
Cytosine Count
22212 bp
Genome Length
90868 bp
Protein-coding Genes
101 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molecular chaperone skp | UMNK88_RS00910 | Not Available | Positive | 203309 - 203794 | 17689.2 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | UMNK88_RS00915 | Not Available | Positive | 203798 - 204823 | 36040.7 |
| 3-hydroxyacyl-acp dehydratase fabz | UMNK88_RS00920 | Not Available | Positive | 204928 - 205383 | 17034.0 |
| acyl-acp--udp-n-acetylglucosamine o-acyltransferase | UMNK88_RS00925 | Not Available | Positive | 205387 - 206175 | 28081.7 |
| lipid-a-disaccharide synthase | UMNK88_RS00930 | Not Available | Positive | 206175 - 207323 | 42384.9 |
| ribonuclease hii | UMNK88_RS00935 | Not Available | Positive | 207320 - 207916 | 21527.3 |
| dna polymerase iii subunit alpha | UMNK88_RS00940 | Not Available | Positive | 207953 - 211435 | 129912.0 |
| acetyl-coa carboxylase carboxyl transferase subunit alpha | UMNK88_RS00945 | Not Available | Positive | 211448 - 212407 | 35243.6 |
| lysine decarboxylase ldcc | UMNK88_RS00950 | Not Available | Positive | 212506 - 214647 | 80594.9 |
| voc family protein | UMNK88_RS00955 | Not Available | Positive | 214704 - 215093 | 14737.4 |
Pathways
12367 pathways
Health Effects
No health effects information available for this bacterium.





