Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | UMNK88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli UMNK88 plasmid pUMNK88_91, complete sequence.
Gene Summary
Adenine Count
21816 bp
Thymine Count
23312 bp
Guanine Count
23528 bp
Cytosine Count
22212 bp
Genome Length
90868 bp
Protein-coding Genes
101 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i methionyl aminopeptidase | UMNK88_RS00860 | Not Available | Negative | 191539 - 192333 | 29332.5 |
| 30s ribosomal protein s2 | UMNK88_RS00865 | Not Available | Positive | 192701 - 193426 | 26745.2 |
| translation elongation factor ts | UMNK88_RS00870 | Not Available | Positive | 193684 - 194535 | 30424.7 |
| ump kinase | UMNK88_RS00875 | Not Available | Positive | 194682 - 195407 | 25971.9 |
| ribosome recycling factor | UMNK88_RS00880 | Not Available | Positive | 195699 - 196256 | 20639.7 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | UMNK88_RS00885 | Not Available | Positive | 196348 - 197544 | 43390.5 |
| (2e,6e)-farnesyl-diphosphate-specific ditrans,polycis-undecaprenyl-diphosphate synthase | UMNK88_RS00890 | Not Available | Positive | 197733 - 198491 | 28314.5 |
| phosphatidate cytidylyltransferase | UMNK88_RS00895 | Not Available | Positive | 198504 - 199361 | 31455.6 |
| sigma e protease regulator rsep | UMNK88_RS00900 | Not Available | Positive | 199373 - 200725 | 49074.2 |
| outer membrane protein assembly factor bama | UMNK88_RS00905 | Not Available | Positive | 200755 - 203187 | 90557.5 |
Pathways
12367 pathways
Health Effects
No health effects information available for this bacterium.





