Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | UMNK88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli UMNK88 plasmid pUMNK88_91, complete sequence.
Gene Summary
Adenine Count
21816 bp
Thymine Count
23312 bp
Guanine Count
23528 bp
Cytosine Count
22212 bp
Genome Length
90868 bp
Protein-coding Genes
101 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tric cation channel family protein | UMNK88_RS00810 | Not Available | Negative | 179828 - 180451 | 22129.1 |
| vitamin b12 abc transporter substrate-binding protein btuf | UMNK88_RS00815 | Not Available | Negative | 180489 - 181289 | 29368.4 |
| 5'-methylthioadenosine/s-adenosylhomocysteine nucleosidase | UMNK88_RS00820 | Not Available | Negative | 181282 - 181980 | 24355.4 |
| dgtpase | UMNK88_RS00825 | Not Available | Positive | 182064 - 183581 | 59358.2 |
| serine endoprotease degp | UMNK88_RS00830 | Not Available | Positive | 183711 - 185135 | 49357.3 |
| dna-binding transcriptional regulator cdar | UMNK88_RS00835 | Not Available | Positive | 185290 - 186447 | 43706.1 |
| duf3461 family protein | UMNK88_RS00840 | Not Available | Negative | 186536 - 186922 | 15097.0 |
| phosphodiesterase yaei | UMNK88_RS00845 | Not Available | Negative | 187084 - 187896 | 29865.1 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | UMNK88_RS00850 | Not Available | Negative | 187950 - 188774 | 29893.8 |
| bifunctional uridylyltransferase/uridylyl-removing protein glnd | UMNK88_RS00855 | Not Available | Negative | 188805 - 191477 | 102396.0 |
Pathways
12367 pathways
Health Effects
No health effects information available for this bacterium.





