Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | UMNK88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli UMNK88 plasmid pUMNK88_91, complete sequence.
Gene Summary
Adenine Count
21816 bp
Thymine Count
23312 bp
Guanine Count
23528 bp
Cytosine Count
22212 bp
Genome Length
90868 bp
Protein-coding Genes
101 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polysaccharide deacetylase family protein | UMNK88_RS00660 | Not Available | Positive | 147073 - 148302 | 46303.7 |
| aspartate 1-decarboxylase | UMNK88_RS00665 | Not Available | Negative | 148306 - 148686 | 13864.5 |
| recombination-promoting nuclease rpnc | UMNK88_RS00670 | Not Available | Positive | 148960 - 149862 | 34608.9 |
| pantoate--beta-alanine ligase | UMNK88_RS00675 | Not Available | Negative | 149936 - 150787 | 31599.6 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | UMNK88_RS00680 | Not Available | Negative | 150799 - 151593 | 28239.1 |
| fimbrial tip-adhesin yadc | UMNK88_RS00685 | Not Available | Negative | 151707 - 152957 | 45290.2 |
| fimbrial-like protein | UMNK88_RS00690 | Not Available | Negative | 152995 - 153591 | 21113.2 |
| fimbrial-like protein yadl | UMNK88_RS00695 | Not Available | Negative | 153618 - 154223 | 21048.0 |
| fimbrial protein | UMNK88_RS00700 | Not Available | Negative | 154235 - 154804 | 20308.1 |
| methyl-accepting chemotaxis protein | UMNK88_RS00705 | Not Available | Negative | 154821 - 157418 | 95297.2 |
Pathways
12367 pathways
Health Effects
No health effects information available for this bacterium.





