Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | UMNK88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli UMNK88 plasmid pUMNK88_91, complete sequence.
Gene Summary
Adenine Count
21816 bp
Thymine Count
23312 bp
Guanine Count
23528 bp
Cytosine Count
22212 bp
Genome Length
90868 bp
Protein-coding Genes
101 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-lactamase regulator ampe | UMNK88_RS00565 | Not Available | Positive | 121273 - 122127 | 32123.9 |
| aromatic amino acid transporter arop | UMNK88_RS00570 | Not Available | Negative | 122170 - 123543 | 49693.1 |
| pyruvate dehydrogenase complex transcriptional repressor pdhr | UMNK88_RS00575 | Not Available | Positive | 124084 - 124848 | 29427.2 |
| pyruvate dehydrogenase (acetyl-transferring), homodimeric type | UMNK88_RS00580 | Not Available | Positive | 125009 - 127672 | 99674.1 |
| pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase | UMNK88_RS00585 | Not Available | Positive | 127687 - 129579 | 66099.8 |
| dihydrolipoyl dehydrogenase | UMNK88_RS00590 | Not Available | Positive | 129904 - 131328 | 50691.4 |
| duf3300 domain-containing protein | UMNK88_RS00595 | Not Available | Negative | 131399 - 133252 | 69418.8 |
| bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase | UMNK88_RS00600 | Not Available | Positive | 133607 - 136204 | 93503.4 |
| protein yacl | UMNK88_RS00605 | Not Available | Positive | 136380 - 136742 | 13942.3 |
| adenosylmethionine decarboxylase | UMNK88_RS00610 | Not Available | Negative | 136780 - 137574 | 30386.3 |
Pathways
12367 pathways
Health Effects
No health effects information available for this bacterium.





