Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | UMNK88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli UMNK88 plasmid pUMNK88_91, complete sequence.
Gene Summary
Adenine Count
21816 bp
Thymine Count
23312 bp
Guanine Count
23528 bp
Cytosine Count
22212 bp
Genome Length
90868 bp
Protein-coding Genes
101 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-isopropylmalate dehydratase small subunit | UMNK88_RS00365 | Not Available | Negative | 80840 - 81445 | 22488.7 |
| 3-isopropylmalate dehydratase large subunit | UMNK88_RS00370 | Not Available | Negative | 81456 - 82856 | 49884.7 |
| 3-isopropylmalate dehydrogenase | UMNK88_RS00375 | Not Available | Negative | 82859 - 83950 | 39519.3 |
| 2-isopropylmalate synthase | UMNK88_RS00380 | Not Available | Negative | 83950 - 85521 | 57302.2 |
| leu operon leader peptide | UMNK88_RS00385 | Not Available | Negative | 85614 - 85700 | 3146.0 |
| transcriptional regulator leuo | UMNK88_RS00390 | Not Available | Positive | 86360 - 87304 | 35573.6 |
| protein yabr | UMNK88_RS33645 | Not Available | Negative | 87459 - 87503 | 1758.19 |
| acetolactate synthase 3 large subunit | UMNK88_RS00395 | Not Available | Positive | 87622 - 89346 | 62988.1 |
| acetolactate synthase small subunit | UMNK88_RS00400 | Not Available | Positive | 89349 - 89840 | 17977.9 |
| frur/shl operon leader peptide | UMNK88_RS00405 | Not Available | Positive | 89852 - 89938 | 3290.94 |
Pathways
12367 pathways
Health Effects
No health effects information available for this bacterium.





