Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | UMNK88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli UMNK88 plasmid pUMNK88_91, complete sequence.
Gene Summary
Adenine Count
21816 bp
Thymine Count
23312 bp
Guanine Count
23528 bp
Cytosine Count
22212 bp
Genome Length
90868 bp
Protein-coding Genes
101 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| co2+/mg2+ efflux protein apag | UMNK88_RS00265 | Not Available | Negative | 54612 - 54989 | 13867.6 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | UMNK88_RS00270 | Not Available | Negative | 54992 - 55813 | 30422.0 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | UMNK88_RS00275 | Not Available | Negative | 55810 - 56799 | 35210.0 |
| peptidylprolyl isomerase sura | UMNK88_RS00280 | Not Available | Negative | 56799 - 58085 | 47286.5 |
| lps assembly protein lptd | UMNK88_RS00285 | Not Available | Negative | 58138 - 60492 | 89675.8 |
| co-chaperone djla | UMNK88_RS00290 | Not Available | Positive | 60747 - 61562 | 30581.2 |
| bifunctional trna pseudouridine(32) synthase/23s rrna pseudouridine(746) synthase rlua | UMNK88_RS00295 | Not Available | Negative | 61679 - 62338 | 24862.1 |
| rna polymerase-associated protein rapa | UMNK88_RS00300 | Not Available | Negative | 62350 - 65256 | 109775.0 |
| dna polymerase ii | UMNK88_RS00305 | Not Available | Negative | 65421 - 67772 | 90072.7 |
| l-ribulose-5-phosphate 4-epimerase | UMNK88_RS00310 | Not Available | Negative | 67847 - 68542 | 25503.4 |
Pathways
12367 pathways
Health Effects
No health effects information available for this bacterium.





