Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | UMNK88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli UMNK88 plasmid pUMNK88_91, complete sequence.
Gene Summary
Adenine Count
21816 bp
Thymine Count
23312 bp
Guanine Count
23528 bp
Cytosine Count
22212 bp
Genome Length
90868 bp
Protein-coding Genes
101 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-carnitine/gamma-butyrobetaine antiporter | UMNK88_RS00215 | Not Available | Negative | 43797 - 45311 | 56590.4 |
| electron transfer flavoprotein fixa | UMNK88_RS00220 | Not Available | Positive | 45784 - 46554 | 27145.2 |
| electron transfer flavoprotein subunit alpha/fixb family protein | UMNK88_RS00225 | Not Available | Positive | 46569 - 47510 | 33485.1 |
| fad-dependent oxidoreductase | UMNK88_RS00230 | Not Available | Positive | 47561 - 48847 | 45719.6 |
| ferredoxin-like protein fixx | UMNK88_RS00235 | Not Available | Positive | 48844 - 49131 | 10479.5 |
| mfs transporter | UMNK88_RS00240 | Not Available | Positive | 49190 - 50521 | 48669.8 |
| glutathione-regulated potassium-efflux system oxidoreductase keff | UMNK88_RS00245 | Not Available | Positive | 50629 - 51159 | 20164.1 |
| glutathione-regulated potassium-efflux system protein kefc | UMNK88_RS00250 | Not Available | Positive | 51152 - 53014 | 67754.0 |
| type 3 dihydrofolate reductase | UMNK88_RS00255 | Not Available | Positive | 53206 - 53685 | 18000.3 |
| bis(5'-nucleosyl)-tetraphosphatase (symmetrical) apah | UMNK88_RS00260 | Not Available | Negative | 53763 - 54605 | 31298.4 |
Pathways
12367 pathways
Health Effects
No health effects information available for this bacterium.





