Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | UMNK88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli UMNK88 plasmid pUMNK88_91, complete sequence.
Gene Summary
Adenine Count
21816 bp
Thymine Count
23312 bp
Guanine Count
23528 bp
Cytosine Count
22212 bp
Genome Length
90868 bp
Protein-coding Genes
101 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonucleoside hydrolase rihc | UMNK88_RS00150 | Not Available | Positive | 30550 - 31464 | 32615.8 |
| 4-hydroxy-tetrahydrodipicolinate reductase | UMNK88_RS00155 | Not Available | Positive | 31631 - 32452 | 28758.3 |
| glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | UMNK88_RS00170 | Not Available | Positive | 32908 - 34056 | 41433.4 |
| carbamoyl-phosphate synthase large subunit | UMNK88_RS00175 | Not Available | Positive | 34074 - 37295 | 117849.0 |
| carnitine metabolism transcriptional regulator caif | UMNK88_RS00185 | Not Available | Positive | 37557 - 37952 | 15437.1 |
| carnitine operon protein caie | UMNK88_RS00190 | Not Available | Negative | 38161 - 38751 | 21167.5 |
| crotonobetainyl-coa hydratase | UMNK88_RS00195 | Not Available | Negative | 38757 - 39542 | 28191.8 |
| crotonobetaine/carnitine-coa ligase | UMNK88_RS00200 | Not Available | Negative | 39651 - 41204 | 58520.3 |
| l-carnitine coa-transferase | UMNK88_RS00205 | Not Available | Negative | 41278 - 42495 | 45140.2 |
| crotonobetainyl-coa dehydrogenase | UMNK88_RS00210 | Not Available | Negative | 42624 - 43766 | 42560.8 |
Pathways
12367 pathways
Health Effects
No health effects information available for this bacterium.





