Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | UMNK88 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli UMNK88 plasmid pUMNK88_91, complete sequence.
Gene Summary
Adenine Count
21816 bp
Thymine Count
23312 bp
Guanine Count
23528 bp
Cytosine Count
22212 bp
Genome Length
90868 bp
Protein-coding Genes
101 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Orf012 | UMNK88_RS15735 | Not Available | Negative | 3044573 - 3046039 | 52025.6 |
| Signal recognition particle protein | UMNK88_RS16280 | Not Available | Negative | 3158420 - 3159781 | 49790.5 |
| Inner membrane protein ypjd | UMNK88_RS16285 | Not Available | Positive | 3159948 - 3160739 | 29263.9 |
| Hlyc/corc family transporter | UMNK88_RS16290 | Not Available | Positive | 3160760 - 3162046 | 48047.2 |
| Heat shock protein | UMNK88_RS16295 | Not Available | Negative | 3162101 - 3162694 | 21813.1 |
| Dna repair protein recn | UMNK88_RS16300 | Not Available | Positive | 3162817 - 3163695 | 32568.3 |
| Dna repair protein recn | UMNK88_RS16305 | Not Available | Positive | 3163781 - 3165442 | 61400.1 |
| Outer membrane protein assembly factor bame | UMNK88_RS16310 | Not Available | Positive | 3165591 - 3165932 | 12302.8 |
| Rnfh family protein | UMNK88_RS16315 | Not Available | Negative | 3165994 - 3166284 | 10790.0 |
| Type ii toxin-antitoxin system toxin rata | UMNK88_RS16320 | Not Available | Negative | 3166274 - 3166711 | 16220.6 |
Pathways
12367 pathways
Health Effects
No health effects information available for this bacterium.





